Protein–RNA interactions for Protein: Q9NS71

GKN1, Gastrokine-1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1Q9NS71 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.27■□□□□ 0.36
GKN1Q9NS71 MIR6080-201ENST00000617359 66 ntBASIC17.27■□□□□ 0.36
GKN1Q9NS71 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
GKN1Q9NS71 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GKN1Q9NS71 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
GKN1Q9NS71 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GKN1Q9NS71 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GKN1Q9NS71 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
GKN1Q9NS71 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
GKN1Q9NS71 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GKN1Q9NS71 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.27■□□□□ 0.35
GKN1Q9NS71 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GKN1Q9NS71 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GKN1Q9NS71 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GKN1Q9NS71 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
GKN1Q9NS71 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 TSPY16P-201ENST00000449843 468 ntBASIC17.26■□□□□ 0.35
GKN1Q9NS71 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 IGHV3-42-201ENST00000520410 361 ntBASIC17.26■□□□□ 0.35
GKN1Q9NS71 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GKN1Q9NS71 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
GKN1Q9NS71 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 KRT8P39-201ENST00000396270 1433 ntBASIC17.25■□□□□ 0.35
GKN1Q9NS71 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.25■□□□□ 0.35
GKN1Q9NS71 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GKN1Q9NS71 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms