Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.13■□□□□ 0.33
SP110Q9HB58 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SP110Q9HB58 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SP110Q9HB58 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SP110Q9HB58 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SP110Q9HB58 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SP110Q9HB58 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SP110Q9HB58 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 FLJ38576-201ENST00000623820 2459 ntBASIC17.12■□□□□ 0.33
SP110Q9HB58 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 HMGA1P7-201ENST00000406908 502 ntBASIC17.12■□□□□ 0.33
SP110Q9HB58 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.12■□□□□ 0.33
SP110Q9HB58 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.12■□□□□ 0.33
SP110Q9HB58 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 AGGF1P2-201ENST00000426656 2106 ntBASIC17.12■□□□□ 0.33
SP110Q9HB58 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.12■□□□□ 0.33
SP110Q9HB58 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SP110Q9HB58 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.11■□□□□ 0.33
SP110Q9HB58 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.11■□□□□ 0.33
SP110Q9HB58 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SP110Q9HB58 AC023274.1-201ENST00000418278 595 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 HLA-J-202ENST00000469281 1241 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.11■□□□□ 0.33
SP110Q9HB58 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.11■□□□□ 0.33
SP110Q9HB58 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.11■□□□□ 0.33
SP110Q9HB58 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.11■□□□□ 0.33
SP110Q9HB58 AC040169.1-201ENST00000565382 521 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.11■□□□□ 0.33
SP110Q9HB58 AL671883.3-201ENST00000603274 991 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 AL513190.1-201ENST00000621254 727 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 AL671710.1-201ENST00000610245 2349 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 HLA-A-202ENST00000376806 1854 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.11■□□□□ 0.33
SP110Q9HB58 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.11■□□□□ 0.33
SP110Q9HB58 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.11■□□□□ 0.33
SP110Q9HB58 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.11■□□□□ 0.33
SP110Q9HB58 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SP110Q9HB58 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP110Q9HB58 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP110Q9HB58 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.1■□□□□ 0.33
SP110Q9HB58 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP110Q9HB58 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SP110Q9HB58 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SP110Q9HB58 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.1■□□□□ 0.33
SP110Q9HB58 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms