Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 AC024909.3-201ENST00000611513 2257 ntBASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TMEM38AQ9H6F2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 AC005412.3-201ENST00000580309 715 ntBASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 AL445228.2-201ENST00000605589 952 ntBASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 AC010654.1-201ENST00000615722 808 ntBASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 GGTLC5P-201ENST00000617623 998 ntBASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM38AQ9H6F2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 AC129492.6-201ENST00000611383 1305 ntBASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 ARMC10P1-201ENST00000313754 855 ntBASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 HCG4-201ENST00000418983 998 ntBASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 AC107918.4-202ENST00000641623 219 ntBASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM38AQ9H6F2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM38AQ9H6F2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms