Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 KRT8P49-201ENST00000604166 1432 ntBASIC14.83□□□□□ -0.04
COMMD4Q9H0A8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 AP002414.1-201ENST00000391405 1147 ntBASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 AC091607.1-201ENST00000490318 1060 ntBASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 AC096582.2-201ENST00000510860 516 ntBASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 DUX4L17-201ENST00000557360 1267 ntBASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 AL139011.1-202ENST00000642063 584 ntBASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 INTS4P1-201ENST00000438455 1935 ntBASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COMMD4Q9H0A8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 AC148477.5-201ENST00000625164 1645 ntBASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 AL031133.1-201ENST00000406807 723 ntBASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.81□□□□□ -0.04
COMMD4Q9H0A8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms