Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AC131009.4-201ENST00000624048 1740 ntBASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 HMGA1P7-201ENST00000406908 502 ntBASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 DUX4L17-201ENST00000557360 1267 ntBASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 MPDU1-223ENST00000582151 728 ntBASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AC092902.6-201ENST00000641783 218 ntBASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSBP3Q9BWW4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSBP3Q9BWW4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SSBP3Q9BWW4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms