Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.85□□□□□ -0.03
VRK1Q99986 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.85□□□□□ -0.03
VRK1Q99986 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.85□□□□□ -0.03
VRK1Q99986 AC136632.2-201ENST00000512891 861 ntBASIC14.85□□□□□ -0.03
VRK1Q99986 AC034105.1-201ENST00000563488 319 ntBASIC14.85□□□□□ -0.03
VRK1Q99986 AC140113.2-201ENST00000604370 208 ntBASIC14.85□□□□□ -0.03
VRK1Q99986 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.85□□□□□ -0.03
VRK1Q99986 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.85□□□□□ -0.03
VRK1Q99986 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.85□□□□□ -0.03
VRK1Q99986 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.85□□□□□ -0.03
VRK1Q99986 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VRK1Q99986 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.84□□□□□ -0.03
VRK1Q99986 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VRK1Q99986 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.84□□□□□ -0.03
VRK1Q99986 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 MYCLP1-201ENST00000372451 1075 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.84□□□□□ -0.03
VRK1Q99986 AC007967.2-201ENST00000432613 625 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 AL591424.1-201ENST00000442569 1213 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 KRT18P3-201ENST00000451602 1288 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 STK25P1-201ENST00000585406 838 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
VRK1Q99986 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VRK1Q99986 FAM197Y3-203ENST00000618346 717 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.84□□□□□ -0.03
VRK1Q99986 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VRK1Q99986 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VRK1Q99986 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.84□□□□□ -0.03
VRK1Q99986 AC097637.2-201ENST00000624096 1997 ntBASIC14.84□□□□□ -0.03
VRK1Q99986 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VRK1Q99986 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
VRK1Q99986 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VRK1Q99986 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VRK1Q99986 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.83□□□□□ -0.03
VRK1Q99986 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.83□□□□□ -0.03
VRK1Q99986 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VRK1Q99986 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
VRK1Q99986 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VRK1Q99986 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VRK1Q99986 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
VRK1Q99986 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VRK1Q99986 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.83□□□□□ -0.04
VRK1Q99986 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VRK1Q99986 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VRK1Q99986 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VRK1Q99986 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.83□□□□□ -0.04
VRK1Q99986 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VRK1Q99986 AC002558.1-201ENST00000488906 803 ntBASIC14.83□□□□□ -0.04
VRK1Q99986 RNA5SP416-201ENST00000516838 111 ntBASIC14.83□□□□□ -0.04
VRK1Q99986 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
VRK1Q99986 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms