Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN18Q99952 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 AL354751.1-201ENST00000412768 1863 ntBASIC18.89■□□□□ 0.61
PTPN18Q99952 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTPN18Q99952 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN18Q99952 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.89■□□□□ 0.61
PTPN18Q99952 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.89■□□□□ 0.61
PTPN18Q99952 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN18Q99952 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.89■□□□□ 0.61
PTPN18Q99952 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
PTPN18Q99952 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN18Q99952 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN18Q99952 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN18Q99952 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PTPN18Q99952 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN18Q99952 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTPN18Q99952 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.89■□□□□ 0.61
PTPN18Q99952 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN18Q99952 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN18Q99952 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN18Q99952 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PTPN18Q99952 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PTPN18Q99952 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PTPN18Q99952 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN18Q99952 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN18Q99952 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN18Q99952 AC026979.3-201ENST00000607315 403 ntBASIC18.88■□□□□ 0.61
PTPN18Q99952 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PTPN18Q99952 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN18Q99952 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 CLK3P2-201ENST00000427566 1453 ntBASIC18.88■□□□□ 0.61
PTPN18Q99952 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PTPN18Q99952 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN18Q99952 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN18Q99952 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN18Q99952 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN18Q99952 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PTPN18Q99952 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PTPN18Q99952 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PTPN18Q99952 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PTPN18Q99952 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 AC092933.1-201ENST00000393644 945 ntBASIC18.87■□□□□ 0.61
PTPN18Q99952 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PTPN18Q99952 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN18Q99952 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN18Q99952 RN7SL219P-201ENST00000582872 296 ntBASIC18.87■□□□□ 0.61
PTPN18Q99952 AC018665.1-201ENST00000622927 1362 ntBASIC18.87■□□□□ 0.61
PTPN18Q99952 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTPN18Q99952 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN18Q99952 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms