Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AP002414.4-201ENST00000589764 1148 ntBASIC19.13■□□□□ 0.65
ARID3AQ99856 AC005336.2-201ENST00000593183 939 ntBASIC19.13■□□□□ 0.65
ARID3AQ99856 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ARID3AQ99856 AC069148.1-201ENST00000608741 768 ntBASIC19.13■□□□□ 0.65
ARID3AQ99856 AL353801.3-201ENST00000609898 542 ntBASIC19.13■□□□□ 0.65
ARID3AQ99856 NPAP1P7-201ENST00000613027 823 ntBASIC19.13■□□□□ 0.65
ARID3AQ99856 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARID3AQ99856 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.13■□□□□ 0.65
ARID3AQ99856 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ARID3AQ99856 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARID3AQ99856 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.13■□□□□ 0.65
ARID3AQ99856 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.13■□□□□ 0.65
ARID3AQ99856 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARID3AQ99856 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARID3AQ99856 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ARID3AQ99856 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC19.12■□□□□ 0.65
ARID3AQ99856 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ARID3AQ99856 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.12■□□□□ 0.65
ARID3AQ99856 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 KRT18P1-202ENST00000452408 1331 ntBASIC19.12■□□□□ 0.65
ARID3AQ99856 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.12■□□□□ 0.65
ARID3AQ99856 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.12■□□□□ 0.65
ARID3AQ99856 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
ARID3AQ99856 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.12■□□□□ 0.65
ARID3AQ99856 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.12■□□□□ 0.65
ARID3AQ99856 TPSP2-201ENST00000561760 610 ntBASIC19.12■□□□□ 0.65
ARID3AQ99856 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.12■□□□□ 0.65
ARID3AQ99856 MIR3180-1-201ENST00000580374 94 ntBASIC19.12■□□□□ 0.65
ARID3AQ99856 MIR3180-3-201ENST00000584616 94 ntBASIC19.12■□□□□ 0.65
ARID3AQ99856 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.12■□□□□ 0.65
ARID3AQ99856 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 AC093458.2-201ENST00000623150 629 ntBASIC19.12■□□□□ 0.65
ARID3AQ99856 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.12■□□□□ 0.65
ARID3AQ99856 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.12■□□□□ 0.65
ARID3AQ99856 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.12■□□□□ 0.65
ARID3AQ99856 AC067930.6-201ENST00000623257 4947 ntBASIC19.12■□□□□ 0.65
ARID3AQ99856 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.12■□□□□ 0.65
ARID3AQ99856 AC060834.1-201ENST00000443027 2032 ntBASIC19.12■□□□□ 0.65
ARID3AQ99856 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
ARID3AQ99856 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARID3AQ99856 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.11■□□□□ 0.65
ARID3AQ99856 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.11■□□□□ 0.65
ARID3AQ99856 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ARID3AQ99856 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.11■□□□□ 0.65
ARID3AQ99856 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.11■□□□□ 0.65
ARID3AQ99856 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.11■□□□□ 0.65
ARID3AQ99856 AC092119.3-201ENST00000612618 583 ntBASIC19.11■□□□□ 0.65
ARID3AQ99856 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 MIR600HG-201ENST00000449175 5984 ntBASIC19.11■□□□□ 0.65
ARID3AQ99856 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARID3AQ99856 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ARID3AQ99856 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.11■□□□□ 0.65
ARID3AQ99856 AC007686.3-201ENST00000619017 3487 ntBASIC19.1■□□□□ 0.65
ARID3AQ99856 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.1■□□□□ 0.65
ARID3AQ99856 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms