Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
ABCA3Q99758 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ABCA3Q99758 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.78■■□□□ 1.08
ABCA3Q99758 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.78■■□□□ 1.08
ABCA3Q99758 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.78■■□□□ 1.08
ABCA3Q99758 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 AC008764.6-201ENST00000595909 2069 ntBASIC21.78■■□□□ 1.08
ABCA3Q99758 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ABCA3Q99758 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.77■■□□□ 1.08
ABCA3Q99758 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.77■■□□□ 1.08
ABCA3Q99758 AC007551.1-201ENST00000457394 519 ntBASIC21.77■■□□□ 1.08
ABCA3Q99758 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.77■■□□□ 1.08
ABCA3Q99758 AC104596.2-201ENST00000512793 793 ntBASIC21.77■■□□□ 1.08
ABCA3Q99758 FAM86HP-204ENST00000513466 959 ntBASIC21.77■■□□□ 1.08
ABCA3Q99758 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
ABCA3Q99758 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.77■■□□□ 1.08
ABCA3Q99758 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.77■■□□□ 1.08
ABCA3Q99758 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ABCA3Q99758 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.77■■□□□ 1.08
ABCA3Q99758 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ABCA3Q99758 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.77■■□□□ 1.08
ABCA3Q99758 AC006033.1-201ENST00000440505 426 ntBASIC21.77■■□□□ 1.08
ABCA3Q99758 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.77■■□□□ 1.08
ABCA3Q99758 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.77■■□□□ 1.08
ABCA3Q99758 AL049840.4-201ENST00000602422 811 ntBASIC21.77■■□□□ 1.08
ABCA3Q99758 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
ABCA3Q99758 AC020765.3-201ENST00000613051 740 ntBASIC21.77■■□□□ 1.08
ABCA3Q99758 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ABCA3Q99758 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ABCA3Q99758 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.76■■□□□ 1.07
ABCA3Q99758 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ABCA3Q99758 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.76■■□□□ 1.07
ABCA3Q99758 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ABCA3Q99758 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.76■■□□□ 1.07
ABCA3Q99758 IGHJ2P-201ENST00000454480 60 ntBASIC21.76■■□□□ 1.07
ABCA3Q99758 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 RNA5SP423-201ENST00000517127 109 ntBASIC21.76■■□□□ 1.07
ABCA3Q99758 SLC25A47P1-201ENST00000531577 414 ntBASIC21.76■■□□□ 1.07
ABCA3Q99758 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.76■■□□□ 1.07
ABCA3Q99758 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.76■■□□□ 1.07
ABCA3Q99758 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC21.76■■□□□ 1.07
ABCA3Q99758 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.76■■□□□ 1.07
ABCA3Q99758 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
ABCA3Q99758 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ABCA3Q99758 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ABCA3Q99758 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.75■■□□□ 1.07
ABCA3Q99758 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.75■■□□□ 1.07
ABCA3Q99758 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.75■■□□□ 1.07
ABCA3Q99758 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 RN7SL399P-201ENST00000471648 279 ntBASIC21.75■■□□□ 1.07
ABCA3Q99758 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.75■■□□□ 1.07
ABCA3Q99758 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ABCA3Q99758 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.75■■□□□ 1.07
ABCA3Q99758 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
ABCA3Q99758 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.75■■□□□ 1.07
ABCA3Q99758 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.75■■□□□ 1.07
ABCA3Q99758 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.75■■□□□ 1.07
ABCA3Q99758 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.75■■□□□ 1.07
ABCA3Q99758 KRT8P22-201ENST00000562317 1415 ntBASIC21.75■■□□□ 1.07
ABCA3Q99758 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ABCA3Q99758 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.75■■□□□ 1.07
ABCA3Q99758 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ABCA3Q99758 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
ABCA3Q99758 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 GPAA1P2-201ENST00000417923 928 ntBASIC21.75■■□□□ 1.07
ABCA3Q99758 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ABCA3Q99758 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms