Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A3Q99624 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A3Q99624 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A3Q99624 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A3Q99624 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A3Q99624 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A3Q99624 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC38A3Q99624 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC38A3Q99624 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 AC027307.2-201ENST00000591252 911 ntBASIC16.17■□□□□ 0.18
SLC38A3Q99624 AC011467.4-201ENST00000594891 528 ntBASIC16.17■□□□□ 0.18
SLC38A3Q99624 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 AC008267.7-201ENST00000624570 1194 ntBASIC16.17■□□□□ 0.18
SLC38A3Q99624 Z92544.3-201ENST00000624747 417 ntBASIC16.17■□□□□ 0.18
SLC38A3Q99624 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A3Q99624 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC38A3Q99624 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 AC092068.3-201ENST00000587894 2016 ntBASIC16.16■□□□□ 0.18
SLC38A3Q99624 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 CNN2P2-201ENST00000443536 909 ntBASIC16.16■□□□□ 0.18
SLC38A3Q99624 CNN2P3-201ENST00000450201 906 ntBASIC16.16■□□□□ 0.18
SLC38A3Q99624 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 KRT18P34-201ENST00000488218 1270 ntBASIC16.16■□□□□ 0.18
SLC38A3Q99624 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 LINC01225-203ENST00000563550 1244 ntBASIC16.16■□□□□ 0.18
SLC38A3Q99624 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 AL136317.3-201ENST00000618497 906 ntBASIC16.16■□□□□ 0.18
SLC38A3Q99624 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms