Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.39□□□□□ -0.27
RNF2Q99496 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RNF2Q99496 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.39□□□□□ -0.27
RNF2Q99496 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RNF2Q99496 AC007950.2-201ENST00000615045 2347 ntBASIC13.39□□□□□ -0.27
RNF2Q99496 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
RNF2Q99496 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.39□□□□□ -0.27
RNF2Q99496 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 NSUN5P1-202ENST00000421140 1535 ntBASIC13.39□□□□□ -0.27
RNF2Q99496 NSUN5P2-203ENST00000457352 1529 ntBASIC13.39□□□□□ -0.27
RNF2Q99496 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF2Q99496 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.38□□□□□ -0.27
RNF2Q99496 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.38□□□□□ -0.27
RNF2Q99496 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.38□□□□□ -0.27
RNF2Q99496 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF2Q99496 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RNF2Q99496 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
RNF2Q99496 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF2Q99496 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF2Q99496 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 AC122714.2-201ENST00000502787 707 ntBASIC13.38□□□□□ -0.27
RNF2Q99496 AC104819.1-201ENST00000504587 486 ntBASIC13.38□□□□□ -0.27
RNF2Q99496 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF2Q99496 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RNF2Q99496 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
RNF2Q99496 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.38□□□□□ -0.27
RNF2Q99496 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 AC099063.4-201ENST00000641099 1602 ntBASIC13.38□□□□□ -0.27
RNF2Q99496 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF2Q99496 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF2Q99496 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RNF2Q99496 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RNF2Q99496 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 FAM220CP-201ENST00000395253 831 ntBASIC13.37□□□□□ -0.27
RNF2Q99496 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF2Q99496 IGHV3-47-201ENST00000425060 335 ntBASIC13.37□□□□□ -0.27
RNF2Q99496 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.37□□□□□ -0.27
RNF2Q99496 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.37□□□□□ -0.27
RNF2Q99496 AC096582.2-201ENST00000510860 516 ntBASIC13.37□□□□□ -0.27
RNF2Q99496 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF2Q99496 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms