Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 AL031731.1-201ENST00000642131 2094 ntBASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 AC009078.2-202ENST00000463353 338 ntBASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 CXCL1P1-201ENST00000502804 216 ntBASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 UNC93B6-202ENST00000528242 690 ntBASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 ALOX12P2-203ENST00000570921 1945 ntBASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 ME2P1-201ENST00000426028 1970 ntBASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A4EQ96PG1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 AC012569.1-201ENST00000591191 1524 ntBASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 FAM185BP-201ENST00000443595 716 ntBASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 AC009947.1-201ENST00000444350 727 ntBASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 IGHV3-22-201ENST00000520721 359 ntBASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 GGT4P-201ENST00000623672 1708 ntBASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MS4A4EQ96PG1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.58■□□□□ 0.09
MS4A4EQ96PG1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 VN2R19P-201ENST00000442399 1052 ntBASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 RNA5SP415-201ENST00000517246 115 ntBASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms