Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 GPS2P2-201ENST00000430745 888 ntBASIC13.6□□□□□ -0.23
ZNF48Q96MX3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 AC015911.4-201ENST00000588022 1070 ntBASIC13.6□□□□□ -0.23
ZNF48Q96MX3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 AKAP8P1-201ENST00000434743 1349 ntBASIC13.6□□□□□ -0.23
ZNF48Q96MX3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 LINC02012-201ENST00000608206 1725 ntBASIC13.59□□□□□ -0.23
ZNF48Q96MX3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 AL161645.1-201ENST00000622716 1255 ntBASIC13.59□□□□□ -0.23
ZNF48Q96MX3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF48Q96MX3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF48Q96MX3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF48Q96MX3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
ZNF48Q96MX3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 SLC25A1P3-201ENST00000395415 828 ntBASIC13.58□□□□□ -0.24
ZNF48Q96MX3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms