Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 AL627223.1-201ENST00000416693 442 ntBASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 AC023141.5-201ENST00000458585 616 ntBASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 AC008267.7-201ENST00000624570 1194 ntBASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AL031731.1-201ENST00000642131 2094 ntBASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AC005237.2-201ENST00000434368 219 ntBASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AC069335.1-201ENST00000489972 472 ntBASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 KRT8P23-201ENST00000560090 1207 ntBASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCD1Q96GM5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.52■□□□□ 0.39
SMARCD1Q96GM5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 AC093520.2-201ENST00000561830 333 ntBASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 LINC01225-203ENST00000563550 1244 ntBASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 AC020765.3-201ENST00000613051 740 ntBASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms