Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TERF1P1-201ENST00000311003 1181 ntBASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 AC005521.1-201ENST00000393351 872 ntBASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 AC211429.1-201ENST00000415277 523 ntBASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 LINC01023-201ENST00000606054 436 ntBASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 GGT4P-201ENST00000623672 1708 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 BX664615.1-201ENST00000443558 458 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 RASA4DP-201ENST00000460726 1199 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 AL441883.1-201ENST00000566170 1045 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 PPT1-215ENST00000641471 2368 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 LINC00895-201ENST00000629028 1637 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 AL135999.2-201ENST00000622438 1686 ntBASIC16.88■□□□□ 0.29
CHMP6Q96FZ7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 AC097493.4-201ENST00000641197 219 ntBASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 AC006449.6-201ENST00000612330 2296 ntBASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms