Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 AC140878.1-201ENST00000565277 250 ntBASIC18.07■□□□□ 0.48
PGBD4Q96DM1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 AC013467.2-201ENST00000605472 835 ntBASIC18.07■□□□□ 0.48
PGBD4Q96DM1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PGBD4Q96DM1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC006277.1-201ENST00000624348 1610 ntBASIC18.06■□□□□ 0.48
PGBD4Q96DM1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC008677.1-201ENST00000519230 1561 ntBASIC18.06■□□□□ 0.48
PGBD4Q96DM1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 BASP1P1-201ENST00000430708 665 ntBASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC055876.3-201ENST00000431496 288 ntBASIC18.06■□□□□ 0.48
PGBD4Q96DM1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC093214.1-201ENST00000511688 1107 ntBASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC138649.4-201ENST00000612222 287 ntBASIC18.06■□□□□ 0.48
PGBD4Q96DM1 MIR6080-201ENST00000617359 66 ntBASIC18.06■□□□□ 0.48
PGBD4Q96DM1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PGBD4Q96DM1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 AL138918.1-201ENST00000568306 659 ntBASIC18.05■□□□□ 0.48
PGBD4Q96DM1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms