Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 AC006538.1-201ENST00000567905 1585 ntBASIC14.87□□□□□ -0.03
RFT1Q96AA3 AL049757.1-201ENST00000616842 1596 ntBASIC14.87□□□□□ -0.03
RFT1Q96AA3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 AC091607.1-201ENST00000490318 1060 ntBASIC14.87□□□□□ -0.03
RFT1Q96AA3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.87□□□□□ -0.03
RFT1Q96AA3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFT1Q96AA3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 FAM220CP-201ENST00000395253 831 ntBASIC14.86□□□□□ -0.03
RFT1Q96AA3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 KRT8P26-201ENST00000534154 1276 ntBASIC14.86□□□□□ -0.03
RFT1Q96AA3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFT1Q96AA3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.86□□□□□ -0.03
RFT1Q96AA3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.86□□□□□ -0.03
RFT1Q96AA3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFT1Q96AA3 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 AC122714.2-201ENST00000502787 707 ntBASIC14.85□□□□□ -0.03
RFT1Q96AA3 KRT18P21-201ENST00000515767 1272 ntBASIC14.85□□□□□ -0.03
RFT1Q96AA3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.85□□□□□ -0.03
RFT1Q96AA3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms