Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.5■□□□□ 0.39
USP13Q92995 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
USP13Q92995 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.5■□□□□ 0.39
USP13Q92995 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.5■□□□□ 0.39
USP13Q92995 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.5■□□□□ 0.39
USP13Q92995 AP001094.4-201ENST00000579008 2176 ntBASIC17.5■□□□□ 0.39
USP13Q92995 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.5■□□□□ 0.39
USP13Q92995 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
USP13Q92995 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
USP13Q92995 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP13Q92995 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
USP13Q92995 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.49■□□□□ 0.39
USP13Q92995 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
USP13Q92995 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.49■□□□□ 0.39
USP13Q92995 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 FAM8A3P-201ENST00000427218 844 ntBASIC17.49■□□□□ 0.39
USP13Q92995 SPCS2P4-201ENST00000436160 681 ntBASIC17.49■□□□□ 0.39
USP13Q92995 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.49■□□□□ 0.39
USP13Q92995 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.49■□□□□ 0.39
USP13Q92995 AC109635.5-201ENST00000533593 962 ntBASIC17.49■□□□□ 0.39
USP13Q92995 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.49■□□□□ 0.39
USP13Q92995 AC091167.2-201ENST00000579581 588 ntBASIC17.49■□□□□ 0.39
USP13Q92995 AC011467.4-201ENST00000594891 528 ntBASIC17.49■□□□□ 0.39
USP13Q92995 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.49■□□□□ 0.39
USP13Q92995 Z92544.3-201ENST00000624747 417 ntBASIC17.49■□□□□ 0.39
USP13Q92995 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.49■□□□□ 0.39
USP13Q92995 AL023806.1-201ENST00000603994 1649 ntBASIC17.49■□□□□ 0.39
USP13Q92995 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.49■□□□□ 0.39
USP13Q92995 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.49■□□□□ 0.39
USP13Q92995 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.49■□□□□ 0.39
USP13Q92995 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP13Q92995 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
USP13Q92995 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP13Q92995 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP13Q92995 AC116353.5-201ENST00000638148 1699 ntBASIC17.48■□□□□ 0.39
USP13Q92995 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP13Q92995 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP13Q92995 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.48■□□□□ 0.39
USP13Q92995 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 KRT18P32-201ENST00000424695 1287 ntBASIC17.48■□□□□ 0.39
USP13Q92995 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.48■□□□□ 0.39
USP13Q92995 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 FAM86GP-201ENST00000448322 971 ntBASIC17.48■□□□□ 0.39
USP13Q92995 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.48■□□□□ 0.39
USP13Q92995 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.48■□□□□ 0.39
USP13Q92995 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.48■□□□□ 0.39
USP13Q92995 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.48■□□□□ 0.39
USP13Q92995 SPCS2P1-201ENST00000561636 679 ntBASIC17.48■□□□□ 0.39
USP13Q92995 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 AC092364.2-202ENST00000597012 1073 ntBASIC17.48■□□□□ 0.39
USP13Q92995 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.48■□□□□ 0.39
USP13Q92995 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP13Q92995 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.48■□□□□ 0.39
USP13Q92995 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP13Q92995 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP13Q92995 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms