Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC107Q8WV48 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC107Q8WV48 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC107Q8WV48 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC107Q8WV48 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC107Q8WV48 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 AC092364.2-201ENST00000596710 2692 ntBASIC14.53□□□□□ -0.08
CCDC107Q8WV48 AC092850.2-201ENST00000623821 2697 ntBASIC14.53□□□□□ -0.08
CCDC107Q8WV48 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 AC006538.1-201ENST00000567905 1585 ntBASIC14.53□□□□□ -0.08
CCDC107Q8WV48 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 KRT8P10-201ENST00000450021 1447 ntBASIC14.53□□□□□ -0.08
CCDC107Q8WV48 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 FAM220CP-201ENST00000395253 831 ntBASIC14.53□□□□□ -0.08
CCDC107Q8WV48 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC107Q8WV48 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 KRT18P1-202ENST00000452408 1331 ntBASIC14.52□□□□□ -0.08
CCDC107Q8WV48 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC107Q8WV48 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 CHCHD2P8-201ENST00000429873 447 ntBASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AC103564.2-201ENST00000432853 1299 ntBASIC14.52□□□□□ -0.09
CCDC107Q8WV48 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AC122714.2-201ENST00000502787 707 ntBASIC14.52□□□□□ -0.09
CCDC107Q8WV48 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AC087388.1-201ENST00000571370 1112 ntBASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AL353801.3-201ENST00000609898 542 ntBASIC14.52□□□□□ -0.09
CCDC107Q8WV48 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.52□□□□□ -0.09
CCDC107Q8WV48 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC107Q8WV48 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms