Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL109936.8-201ENST00000641772 604 ntBASIC20.06■□□□□ 0.8
SNED1Q8TER0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNED1Q8TER0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.06■□□□□ 0.8
SNED1Q8TER0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 MYCLP2-201ENST00000449268 967 ntBASIC20.05■□□□□ 0.8
SNED1Q8TER0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 COX11-210ENST00000639671 696 ntBASIC20.05■□□□□ 0.8
SNED1Q8TER0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SNED1Q8TER0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNED1Q8TER0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.04■□□□□ 0.8
SNED1Q8TER0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 USP32P1-208ENST00000506594 1164 ntBASIC20.04■□□□□ 0.8
SNED1Q8TER0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 AC093726.1-201ENST00000608064 963 ntBASIC20.04■□□□□ 0.8
SNED1Q8TER0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNED1Q8TER0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.04■□□□□ 0.8
SNED1Q8TER0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 MIR6775-201ENST00000617557 69 ntBASIC20.03■□□□□ 0.8
SNED1Q8TER0 AL589702.1-201ENST00000641229 1509 ntBASIC20.03■□□□□ 0.8
SNED1Q8TER0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNED1Q8TER0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.03■□□□□ 0.8
SNED1Q8TER0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms