Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AC073508.3-201ENST00000619697 1419 ntBASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 LIN28AP1-201ENST00000429574 405 ntBASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 RN7SL606P-201ENST00000472779 293 ntBASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AC010203.1-204ENST00000548782 407 ntBASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AC005336.2-201ENST00000593183 939 ntBASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AD001527.2-201ENST00000622994 785 ntBASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IL1Q8TBN0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 ACTG1P4-201ENST00000425123 1122 ntBASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 AC013467.2-201ENST00000605472 835 ntBASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAB3IL1Q8TBN0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms