Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.53□□□□□ -0.4
NUP35Q8NFH5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 RPS2P55-201ENST00000397318 883 ntBASIC12.53□□□□□ -0.4
NUP35Q8NFH5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 STK25P1-201ENST00000585406 838 ntBASIC12.53□□□□□ -0.4
NUP35Q8NFH5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 FAM197Y4-202ENST00000622692 608 ntBASIC12.53□□□□□ -0.4
NUP35Q8NFH5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 LINC02447-202ENST00000501888 2146 ntBASIC12.53□□□□□ -0.4
NUP35Q8NFH5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NUP35Q8NFH5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 AL049757.1-201ENST00000616842 1596 ntBASIC12.52□□□□□ -0.4
NUP35Q8NFH5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NUP35Q8NFH5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 AL139011.1-202ENST00000642063 584 ntBASIC12.52□□□□□ -0.41
NUP35Q8NFH5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NUP35Q8NFH5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms