Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.78■□□□□ 0.28
EFCAB3Q8N7B9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 AC010460.3-201ENST00000511359 1579 ntBASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 IGHV3-47-201ENST00000425060 335 ntBASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 AP005901.3-202ENST00000581653 237 ntBASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EFCAB3Q8N7B9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 AC125634.1-201ENST00000438758 1403 ntBASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.77■□□□□ 0.27
EFCAB3Q8N7B9 LINC02012-201ENST00000608206 1725 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 PMS2P7-201ENST00000506558 1336 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AC103702.1-201ENST00000548801 2630 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 SLC25A1P3-201ENST00000395415 828 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AL031284.1-201ENST00000419297 478 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AC007967.3-201ENST00000434308 558 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AC092183.1-201ENST00000469884 875 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 RNPS1P1-201ENST00000507437 918 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AF238378.1-201ENST00000526806 358 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AL138831.2-201ENST00000606564 490 ntBASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EFCAB3Q8N7B9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
EFCAB3Q8N7B9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EFCAB3Q8N7B9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
EFCAB3Q8N7B9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EFCAB3Q8N7B9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EFCAB3Q8N7B9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EFCAB3Q8N7B9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EFCAB3Q8N7B9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms