Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LINC00554-201ENST00000564841 3011 ntBASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 PCDH8P1-201ENST00000428983 2773 ntBASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 AD000864.1-201ENST00000624076 2295 ntBASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf42Q8N5U0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 TSPY26P-202ENST00000565928 3884 ntBASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 MRPL20P1-201ENST00000400819 433 ntBASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 VN2R19P-201ENST00000442399 1052 ntBASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf42Q8N5U0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms