Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SLC22A20-204ENST00000530038 1673 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 AKAP8P1-201ENST00000434743 1349 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 AL353732.1-201ENST00000569618 1459 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 FAM58DP-201ENST00000428076 619 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 AC069335.1-201ENST00000489972 472 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 AC109635.5-201ENST00000533593 962 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 AC025678.2-201ENST00000562061 970 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 MIR3197-201ENST00000582241 73 ntBASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHTF2Q8N3S3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 AC016396.2-201ENST00000562575 1417 ntBASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 AL592309.1-201ENST00000443127 649 ntBASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 SPCS2P1-201ENST00000561636 679 ntBASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PHTF2Q8N3S3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.24■□□□□ 0.35
PHTF2Q8N3S3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
PHTF2Q8N3S3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms