Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 BAD-202ENST00000394531 631 ntTSL 3 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 AC092580.3-201ENST00000430932 139 ntBASIC25.83■■□□□ 1.73
VPS8Q8N3P4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 RNA5SP410-201ENST00000516285 106 ntBASIC25.83■■□□□ 1.73
VPS8Q8N3P4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 BAD-207ENST00000544785 525 ntTSL 3 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 SPDYE12P-201ENST00000618416 771 ntBASIC25.83■■□□□ 1.73
VPS8Q8N3P4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 PCDHA12-202ENST00000613593 2588 ntBASIC25.83■■□□□ 1.73
VPS8Q8N3P4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS8Q8N3P4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC25.83■■□□□ 1.72
VPS8Q8N3P4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC25.83■■□□□ 1.72
VPS8Q8N3P4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC25.83■■□□□ 1.72
VPS8Q8N3P4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 AC107890.1-201ENST00000422478 521 ntBASIC25.82■■□□□ 1.72
VPS8Q8N3P4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 POU5F1P6-201ENST00000466990 990 ntBASIC25.82■■□□□ 1.72
VPS8Q8N3P4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 AL158211.3-201ENST00000607385 239 ntBASIC25.82■■□□□ 1.72
VPS8Q8N3P4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 NKILA-202ENST00000614771 2598 ntBASIC25.82■■□□□ 1.72
VPS8Q8N3P4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS8Q8N3P4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 CCDC74BP1-201ENST00000508880 1123 ntBASIC25.81■■□□□ 1.72
VPS8Q8N3P4 DUX4L27-201ENST00000554796 1261 ntBASIC25.81■■□□□ 1.72
VPS8Q8N3P4 MIR4453-201ENST00000584019 89 ntBASIC25.81■■□□□ 1.72
VPS8Q8N3P4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC25.81■■□□□ 1.72
VPS8Q8N3P4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 AC005052.1-201ENST00000625181 2492 ntBASIC25.8■■□□□ 1.72
VPS8Q8N3P4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC25.8■■□□□ 1.72
VPS8Q8N3P4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms