Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PGBD3Q8N328 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PGBD3Q8N328 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PGBD3Q8N328 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.96■□□□□ 0.3
PGBD3Q8N328 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PGBD3Q8N328 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PGBD3Q8N328 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.96■□□□□ 0.3
PGBD3Q8N328 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 AC133963.1-201ENST00000504166 1679 ntBASIC16.95■□□□□ 0.3
PGBD3Q8N328 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.95■□□□□ 0.3
PGBD3Q8N328 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 AC236430.1-201ENST00000402231 743 ntBASIC16.95■□□□□ 0.3
PGBD3Q8N328 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.95■□□□□ 0.3
PGBD3Q8N328 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 TERF1P3-201ENST00000505638 1227 ntBASIC16.95■□□□□ 0.3
PGBD3Q8N328 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.95■□□□□ 0.3
PGBD3Q8N328 AC140878.1-201ENST00000565277 250 ntBASIC16.95■□□□□ 0.3
PGBD3Q8N328 AL031055.1-201ENST00000606362 631 ntBASIC16.95■□□□□ 0.3
PGBD3Q8N328 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PGBD3Q8N328 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.95■□□□□ 0.3
PGBD3Q8N328 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PGBD3Q8N328 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PGBD3Q8N328 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 AC109635.5-201ENST00000533593 962 ntBASIC16.94■□□□□ 0.3
PGBD3Q8N328 SLC25A39P2-201ENST00000537614 270 ntBASIC16.94■□□□□ 0.3
PGBD3Q8N328 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 AC027307.2-201ENST00000591252 911 ntBASIC16.94■□□□□ 0.3
PGBD3Q8N328 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.94■□□□□ 0.3
PGBD3Q8N328 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PGBD3Q8N328 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PGBD3Q8N328 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.93■□□□□ 0.3
PGBD3Q8N328 AC087641.1-201ENST00000557561 1021 ntBASIC16.93■□□□□ 0.3
PGBD3Q8N328 LINC01225-203ENST00000563550 1244 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms