Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 AC011270.2-201ENST00000624293 2550 ntBASIC16.16■□□□□ 0.18
KRT78Q8N1N4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 VN2R19P-201ENST00000442399 1052 ntBASIC16.15■□□□□ 0.18
KRT78Q8N1N4 CXCL1P1-201ENST00000502804 216 ntBASIC16.15■□□□□ 0.18
KRT78Q8N1N4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 OR7E47P-204ENST00000575924 449 ntBASIC16.15■□□□□ 0.18
KRT78Q8N1N4 CYP2A7P1-201ENST00000595391 815 ntBASIC16.15■□□□□ 0.18
KRT78Q8N1N4 AL121894.2-201ENST00000602977 491 ntBASIC16.15■□□□□ 0.18
KRT78Q8N1N4 AC084018.2-201ENST00000613093 2607 ntBASIC16.15■□□□□ 0.18
KRT78Q8N1N4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 AC068587.6-202ENST00000641839 5619 ntBASIC16.15■□□□□ 0.18
KRT78Q8N1N4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
KRT78Q8N1N4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
KRT78Q8N1N4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.14■□□□□ 0.18
KRT78Q8N1N4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
KRT78Q8N1N4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.14■□□□□ 0.18
KRT78Q8N1N4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 PCDHA14-201ENST00000506751 2298 ntBASIC16.14■□□□□ 0.17
KRT78Q8N1N4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.14■□□□□ 0.17
KRT78Q8N1N4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 FAM185BP-201ENST00000443595 716 ntBASIC16.14■□□□□ 0.17
KRT78Q8N1N4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.14■□□□□ 0.17
KRT78Q8N1N4 Z83851.2-201ENST00000609564 659 ntBASIC16.14■□□□□ 0.17
KRT78Q8N1N4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 SLC22A20-204ENST00000530038 1673 ntBASIC16.14■□□□□ 0.17
KRT78Q8N1N4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT78Q8N1N4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms