Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 TFAMP1-201ENST00000412727 736 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AC254562.1-201ENST00000417586 456 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SPDYE11-202ENST00000450699 704 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 KRT8P48-201ENST00000515599 1220 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 FAM86C2P-203ENST00000528684 1004 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AL135744.1-201ENST00000565098 629 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SPDYE9P-201ENST00000570642 692 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AC021097.1-201ENST00000607902 574 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AC026120.1-201ENST00000611536 926 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SPDYE10P-202ENST00000612005 668 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SPDYE8P-202ENST00000612377 668 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AC105339.1-204ENST00000636249 355 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 AL603756.1-201ENST00000606511 2163 ntBASIC17.2■□□□□ 0.34
LGI2Q8N0V4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LGI2Q8N0V4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 RNF216P1-203ENST00000404404 2427 ntBASIC17.19■□□□□ 0.34
LGI2Q8N0V4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 CNN2P11-201ENST00000429351 262 ntBASIC17.19■□□□□ 0.34
LGI2Q8N0V4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.19■□□□□ 0.34
LGI2Q8N0V4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 AC016027.1-202ENST00000607927 1699 ntBASIC17.18■□□□□ 0.34
LGI2Q8N0V4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGI2Q8N0V4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms