Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 AC074044.1-201ENST00000609673 707 ntBASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.46■□□□□ 0.06
COL27A1Q8IZC6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 RN7SL752P-201ENST00000463779 287 ntBASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 AL158212.4-201ENST00000624062 1286 ntBASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL27A1Q8IZC6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 FAM86MP-201ENST00000340703 885 ntBASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AP002490.2-201ENST00000524791 560 ntBASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 Z97205.2-201ENST00000564697 1639 ntBASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 PCGF3-213ENST00000620529 1899 ntBASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AL512343.1-201ENST00000605837 169 ntBASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 AC026979.3-201ENST00000607315 403 ntBASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 MIR6775-201ENST00000617557 69 ntBASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms