Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC105Q8IYK2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 SPDYE21P-201ENST00000413323 827 ntBASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 HLA-J-202ENST00000469281 1241 ntBASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 AC018845.2-201ENST00000568326 409 ntBASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 AD001527.2-201ENST00000622994 785 ntBASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC105Q8IYK2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 MYCLP1-201ENST00000372451 1075 ntBASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 GPR89P-201ENST00000407924 1495 ntBASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC105Q8IYK2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC105Q8IYK2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC105Q8IYK2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC105Q8IYK2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC105Q8IYK2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC105Q8IYK2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC105Q8IYK2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC105Q8IYK2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms