Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC091167.2-201ENST00000579581 588 ntBASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.13■□□□□ 0.01
RP1L1Q8IWN7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 BTBD7P1-201ENST00000447253 1453 ntBASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 AC027369.6-201ENST00000525520 931 ntBASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 RAB43P1-201ENST00000561790 589 ntBASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RP1L1Q8IWN7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 AP006294.1-201ENST00000415407 339 ntBASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 AL162274.1-201ENST00000617191 1098 ntBASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 AL033527.4-201ENST00000641026 673 ntBASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 AC012313.1-201ENST00000593393 3059 ntBASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 AC007389.4-201ENST00000454674 793 ntBASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms