Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP4Q86YS3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP4Q86YS3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP4Q86YS3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RAB11FIP4Q86YS3 AC124067.4-201ENST00000519691 2379 ntBASIC19.62■□□□□ 0.73
RAB11FIP4Q86YS3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP4Q86YS3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP4Q86YS3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 PCDHB19P-201ENST00000570871 2371 ntBASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 RHOQP3-201ENST00000437982 621 ntBASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 KRT19P2-202ENST00000557173 1012 ntBASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 AL512652.2-201ENST00000625156 1716 ntBASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 AC012569.1-201ENST00000591191 1524 ntBASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP4Q86YS3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 RNA5SP416-201ENST00000516838 111 ntBASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AC087641.1-201ENST00000557561 1021 ntBASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AC013467.2-201ENST00000605472 835 ntBASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RAB11FIP4Q86YS3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms