Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 AC093724.1-201ENST00000448659 1027 ntBASIC20.67■□□□□ 0.9
COL23A1Q86Y22 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 ZNF767P-206ENST00000513792 565 ntBASIC20.67■□□□□ 0.9
COL23A1Q86Y22 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 AC116353.5-201ENST00000638148 1699 ntBASIC20.67■□□□□ 0.9
COL23A1Q86Y22 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 ELK2AP-201ENST00000392510 1007 ntBASIC20.66■□□□□ 0.9
COL23A1Q86Y22 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 AC025048.3-201ENST00000590609 569 ntBASIC20.66■□□□□ 0.9
COL23A1Q86Y22 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 AC074044.1-201ENST00000609673 707 ntBASIC20.66■□□□□ 0.9
COL23A1Q86Y22 AC005702.4-201ENST00000618393 416 ntBASIC20.66■□□□□ 0.9
COL23A1Q86Y22 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 AC006277.1-201ENST00000624348 1610 ntBASIC20.66■□□□□ 0.9
COL23A1Q86Y22 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL23A1Q86Y22 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 AC092506.1-202ENST00000401022 528 ntBASIC20.65■□□□□ 0.9
COL23A1Q86Y22 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 AC007551.1-201ENST00000457394 519 ntBASIC20.65■□□□□ 0.9
COL23A1Q86Y22 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 TIMM17BP1-201ENST00000545713 516 ntBASIC20.65■□□□□ 0.9
COL23A1Q86Y22 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL23A1Q86Y22 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.64■□□□□ 0.9
COL23A1Q86Y22 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.64■□□□□ 0.9
COL23A1Q86Y22 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.64■□□□□ 0.9
COL23A1Q86Y22 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.64■□□□□ 0.9
COL23A1Q86Y22 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL23A1Q86Y22 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 MIR5189-201ENST00000577370 114 ntBASIC20.64■□□□□ 0.89
COL23A1Q86Y22 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL23A1Q86Y22 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 KRT8P39-201ENST00000396270 1433 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms