Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 PCGF3-213ENST00000620529 1899 ntBASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 AC092910.1-201ENST00000482027 1129 ntBASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD1LQ86WJ1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 FAM185BP-201ENST00000443595 716 ntBASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 FAAHP1-202ENST00000446499 1238 ntBASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 AL773604.1-201ENST00000617417 272 ntBASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 AL596087.1-201ENST00000400979 1969 ntBASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD1LQ86WJ1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 AL031284.1-201ENST00000419297 478 ntBASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 RNA5SP419-201ENST00000515908 135 ntBASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 AC010654.1-201ENST00000615722 808 ntBASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms