Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 AC007292.2-201ENST00000593524 1812 ntBASIC16.9■□□□□ 0.3
PACS2Q86VP3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 AC005252.3-201ENST00000623855 2258 ntBASIC16.9■□□□□ 0.3
PACS2Q86VP3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PACS2Q86VP3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PACS2Q86VP3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 AL121956.5-201ENST00000625261 221 ntBASIC16.89■□□□□ 0.29
PACS2Q86VP3 AL157888.1-201ENST00000631930 593 ntBASIC16.89■□□□□ 0.29
PACS2Q86VP3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PACS2Q86VP3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PACS2Q86VP3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PACS2Q86VP3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACS2Q86VP3 SDHAP2-201ENST00000455183 2001 ntBASIC16.87■□□□□ 0.29
PACS2Q86VP3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PACS2Q86VP3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.87■□□□□ 0.29
PACS2Q86VP3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PACS2Q86VP3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACS2Q86VP3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACS2Q86VP3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACS2Q86VP3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACS2Q86VP3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms