Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 AC117500.6-201ENST00000624871 588 ntBASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 FLJ38576-201ENST00000623820 2459 ntBASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP1BQ7LBR1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 AL135999.2-201ENST00000622438 1686 ntBASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 AC006504.4-201ENST00000592118 1568 ntBASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 KRT18P27-201ENST00000427733 1299 ntBASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 UNC93B6-202ENST00000528242 690 ntBASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 AC145285.3-201ENST00000564603 959 ntBASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 AC027601.4-201ENST00000611259 610 ntBASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 GGTLC5P-201ENST00000617623 998 ntBASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHMP1BQ7LBR1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 ELK2BP-201ENST00000415014 1224 ntBASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 AL591424.1-201ENST00000442569 1213 ntBASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 AC108751.1-201ENST00000490852 363 ntBASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 RPS15P9-201ENST00000494093 319 ntBASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP1BQ7LBR1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms