Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 FAM58DP-201ENST00000428076 619 ntBASIC19.8■□□□□ 0.76
CTR9Q6PD62 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 AP002490.2-201ENST00000524791 560 ntBASIC19.8■□□□□ 0.76
CTR9Q6PD62 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CTR9Q6PD62 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTR9Q6PD62 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AC046158.3-201ENST00000624947 2558 ntBASIC19.79■□□□□ 0.76
CTR9Q6PD62 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AL513477.1-201ENST00000602865 2407 ntBASIC19.79■□□□□ 0.76
CTR9Q6PD62 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AL138918.1-201ENST00000568306 659 ntBASIC19.79■□□□□ 0.76
CTR9Q6PD62 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AL139011.1-202ENST00000642063 584 ntBASIC19.79■□□□□ 0.76
CTR9Q6PD62 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AL512652.2-201ENST00000625156 1716 ntBASIC19.79■□□□□ 0.76
CTR9Q6PD62 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTR9Q6PD62 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CTR9Q6PD62 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 AL603756.1-201ENST00000606511 2163 ntBASIC19.78■□□□□ 0.76
CTR9Q6PD62 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 TSEN15P1-201ENST00000423257 515 ntBASIC19.78■□□□□ 0.76
CTR9Q6PD62 AC005237.2-201ENST00000434368 219 ntBASIC19.78■□□□□ 0.76
CTR9Q6PD62 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 AC023141.5-201ENST00000458585 616 ntBASIC19.78■□□□□ 0.76
CTR9Q6PD62 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms