Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 AC109635.5-201ENST00000533593 962 ntBASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 LINC01225-203ENST00000563550 1244 ntBASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFRKBQ6P4R8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 BASP1P1-201ENST00000430708 665 ntBASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 KLF2P3-201ENST00000451977 1087 ntBASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 INGX-202ENST00000489074 768 ntBASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 IGHV3-62-201ENST00000520057 340 ntBASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 AC084121.4-201ENST00000641598 221 ntBASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 AF228730.8-201ENST00000642140 221 ntBASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NFRKBQ6P4R8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 AGGF1P2-201ENST00000426656 2106 ntBASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 RBPMS2P1-201ENST00000437762 623 ntBASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFRKBQ6P4R8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NFRKBQ6P4R8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
NFRKBQ6P4R8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms