Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 EGFEM1P-202ENST00000431685 1563 ntBASIC17.55■□□□□ 0.4
RNF43Q68DV7 AL513477.1-201ENST00000602865 2407 ntBASIC17.55■□□□□ 0.4
RNF43Q68DV7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 C20orf181-201ENST00000623918 480 ntBASIC17.55■□□□□ 0.4
RNF43Q68DV7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 COX20P2-201ENST00000452636 358 ntBASIC17.54■□□□□ 0.4
RNF43Q68DV7 CXCL1P1-201ENST00000502804 216 ntBASIC17.54■□□□□ 0.4
RNF43Q68DV7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 PDPK2P-202ENST00000562415 1191 ntBASIC17.54■□□□□ 0.4
RNF43Q68DV7 AC018845.2-201ENST00000568326 409 ntBASIC17.54■□□□□ 0.4
RNF43Q68DV7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 REXO1L3P-201ENST00000622202 1288 ntBASIC17.54■□□□□ 0.4
RNF43Q68DV7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.54■□□□□ 0.4
RNF43Q68DV7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF43Q68DV7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF43Q68DV7 AC005915.1-201ENST00000624912 2018 ntBASIC17.54■□□□□ 0.4
RNF43Q68DV7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF43Q68DV7 DUX4L17-201ENST00000557360 1267 ntBASIC17.53■□□□□ 0.4
RNF43Q68DV7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 AL513190.1-201ENST00000621254 727 ntBASIC17.53■□□□□ 0.4
RNF43Q68DV7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF43Q68DV7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms