Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 RN7SL399P-201ENST00000471648 279 ntBASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 FAM86HP-204ENST00000513466 959 ntBASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AP001889.1-201ENST00000525414 633 ntBASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AC124283.3-201ENST00000570869 594 ntBASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AC020765.3-201ENST00000613051 740 ntBASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC26.78■■□□□ 1.88
SNAPC4Q5SXM2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 COG4-212ENST00000564653 590 ntTSL 5 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 BRI3BPP1-201ENST00000594224 787 ntBASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 KRT8P39-201ENST00000396270 1433 ntBASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC26.77■■□□□ 1.88
SNAPC4Q5SXM2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC26.76■■□□□ 1.88
SNAPC4Q5SXM2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC26.76■■□□□ 1.88
SNAPC4Q5SXM2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
SNAPC4Q5SXM2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 AL139010.1-201ENST00000454878 894 ntBASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC26.76■■□□□ 1.87
SNAPC4Q5SXM2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 MIR663B-201ENST00000408361 115 ntBASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 FTH1P14-201ENST00000482930 551 ntBASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNAPC4Q5SXM2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 AGER-203ENST00000375065 665 ntTSL 2 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms