Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 AC064862.7-201ENST00000604520 867 ntBASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 AL139288.1-201ENST00000623748 933 ntBASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 FLJ16779-201ENST00000612722 7638 ntBASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 TOP3BP1-201ENST00000420768 1380 ntBASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6AP1LQ52LC2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6AP1LQ52LC2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6AP1LQ52LC2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6AP1LQ52LC2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6AP1LQ52LC2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6AP1LQ52LC2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6AP1LQ52LC2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.21■□□□□ 0.18
ATP6AP1LQ52LC2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 AC106795.1-205ENST00000512851 1056 ntBASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 AC091076.1-201ENST00000610741 619 ntBASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6AP1LQ52LC2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6AP1LQ52LC2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms