Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRFAM7AQ494W8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 AC046185.3-201ENST00000623228 1824 ntBASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRFAM7AQ494W8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 METTL21AP1-201ENST00000438852 635 ntBASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AC068472.1-201ENST00000474589 881 ntBASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 UNC93B6-202ENST00000528242 690 ntBASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 SNHG9-202ENST00000564014 471 ntBASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AC011467.2-201ENST00000598425 242 ntBASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AL596442.2-201ENST00000610240 980 ntBASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AC079328.2-201ENST00000561241 3354 ntBASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRFAM7AQ494W8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AC093525.9-201ENST00000624961 1746 ntBASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AC023274.1-201ENST00000418278 595 ntBASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 HTR5BP-201ENST00000430851 1154 ntBASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AP006288.1-201ENST00000446065 395 ntBASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.69□□□□□ -0.06
CHRFAM7AQ494W8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms