Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 AC073648.2-201ENST00000510116 352 ntBASIC11.1□□□□□ -0.63
SYCNQ0VAF6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 CLEC4GP1-201ENST00000596555 870 ntBASIC11.1□□□□□ -0.63
SYCNQ0VAF6 IFNL4P1-201ENST00000607083 540 ntBASIC11.1□□□□□ -0.63
SYCNQ0VAF6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 AC004706.3-202ENST00000621574 984 ntBASIC11.1□□□□□ -0.63
SYCNQ0VAF6 AF228730.7-201ENST00000641842 219 ntBASIC11.1□□□□□ -0.63
SYCNQ0VAF6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
SYCNQ0VAF6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 LINC00895-201ENST00000629028 1637 ntBASIC11.09□□□□□ -0.63
SYCNQ0VAF6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 PI4KAP1-204ENST00000612579 1703 ntBASIC11.09□□□□□ -0.63
SYCNQ0VAF6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 LAGE3P1-201ENST00000425356 484 ntBASIC11.09□□□□□ -0.63
SYCNQ0VAF6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 KRT18P56-201ENST00000507275 550 ntBASIC11.09□□□□□ -0.63
SYCNQ0VAF6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.09□□□□□ -0.63
SYCNQ0VAF6 AL645728.1-201ENST00000366221 2101 ntBASIC11.09□□□□□ -0.63
SYCNQ0VAF6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms