Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC004840.1-201ENST00000636359 365 ntBASIC18.88■□□□□ 0.61
CCNA1P78396 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNA1P78396 AC138969.3-201ENST00000546612 1459 ntBASIC18.88■□□□□ 0.61
CCNA1P78396 AC138932.2-201ENST00000548268 1459 ntBASIC18.88■□□□□ 0.61
CCNA1P78396 AC126755.4-201ENST00000549796 1459 ntBASIC18.88■□□□□ 0.61
CCNA1P78396 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNA1P78396 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNA1P78396 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNA1P78396 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.88■□□□□ 0.61
CCNA1P78396 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCNA1P78396 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCNA1P78396 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNA1P78396 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNA1P78396 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNA1P78396 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNA1P78396 AC007274.1-201ENST00000439805 662 ntBASIC18.87■□□□□ 0.61
CCNA1P78396 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNA1P78396 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCNA1P78396 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.87■□□□□ 0.61
CCNA1P78396 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.87■□□□□ 0.61
CCNA1P78396 AC024267.1-201ENST00000582320 895 ntBASIC18.87■□□□□ 0.61
CCNA1P78396 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNA1P78396 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNA1P78396 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNA1P78396 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNA1P78396 PKD1P1-201ENST00000458669 6805 ntBASIC18.87■□□□□ 0.61
CCNA1P78396 NEFHP1-201ENST00000412845 2629 ntBASIC18.87■□□□□ 0.61
CCNA1P78396 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNA1P78396 AC134043.2-201ENST00000624206 2238 ntBASIC18.86■□□□□ 0.61
CCNA1P78396 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNA1P78396 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCNA1P78396 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNA1P78396 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNA1P78396 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 ATP5G2P4-201ENST00000442175 420 ntBASIC18.86■□□□□ 0.61
CCNA1P78396 SERBP1P3-201ENST00000459980 809 ntBASIC18.86■□□□□ 0.61
CCNA1P78396 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.86■□□□□ 0.61
CCNA1P78396 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNA1P78396 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNA1P78396 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCNA1P78396 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCNA1P78396 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNA1P78396 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNA1P78396 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.85■□□□□ 0.61
CCNA1P78396 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.85■□□□□ 0.61
CCNA1P78396 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.85■□□□□ 0.61
CCNA1P78396 GPR53P-205ENST00000457298 1084 ntBASIC18.85■□□□□ 0.61
CCNA1P78396 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNA1P78396 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.85■□□□□ 0.61
CCNA1P78396 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNA1P78396 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCNA1P78396 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNA1P78396 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNA1P78396 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms