Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 AC132872.4-202ENST00000622924 2756 ntBASIC13.68□□□□□ -0.22
SPCS3P61009 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
SPCS3P61009 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.68□□□□□ -0.22
SPCS3P61009 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.68□□□□□ -0.22
SPCS3P61009 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPCS3P61009 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SPCS3P61009 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SPCS3P61009 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.68□□□□□ -0.22
SPCS3P61009 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 ACTG1P4-201ENST00000425123 1122 ntBASIC13.67□□□□□ -0.22
SPCS3P61009 HLA-J-202ENST00000469281 1241 ntBASIC13.67□□□□□ -0.22
SPCS3P61009 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.67□□□□□ -0.22
SPCS3P61009 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.67□□□□□ -0.22
SPCS3P61009 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
SPCS3P61009 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SPCS3P61009 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SPCS3P61009 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPCS3P61009 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 AC105917.1-201ENST00000506637 2539 ntBASIC13.66□□□□□ -0.22
SPCS3P61009 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SPCS3P61009 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.66□□□□□ -0.22
SPCS3P61009 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.66□□□□□ -0.22
SPCS3P61009 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.66□□□□□ -0.22
SPCS3P61009 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.66□□□□□ -0.22
SPCS3P61009 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.66□□□□□ -0.22
SPCS3P61009 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.66□□□□□ -0.22
SPCS3P61009 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SPCS3P61009 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.66□□□□□ -0.22
SPCS3P61009 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.66□□□□□ -0.22
SPCS3P61009 SIGLEC30P-201ENST00000455569 941 ntBASIC13.66□□□□□ -0.22
SPCS3P61009 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SPCS3P61009 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms