Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 GGT4P-201ENST00000623672 1708 ntBASIC21.81■■□□□ 1.08
RIPK4P57078 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK4P57078 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK4P57078 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK4P57078 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.81■■□□□ 1.08
RIPK4P57078 AC092183.1-201ENST00000469884 875 ntBASIC21.81■■□□□ 1.08
RIPK4P57078 RN7SL589P-201ENST00000481268 310 ntBASIC21.81■■□□□ 1.08
RIPK4P57078 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.81■■□□□ 1.08
RIPK4P57078 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.81■■□□□ 1.08
RIPK4P57078 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.81■■□□□ 1.08
RIPK4P57078 AC093520.2-201ENST00000561830 333 ntBASIC21.81■■□□□ 1.08
RIPK4P57078 AL138918.1-201ENST00000568306 659 ntBASIC21.81■■□□□ 1.08
RIPK4P57078 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.81■■□□□ 1.08
RIPK4P57078 AC027612.4-201ENST00000605371 583 ntBASIC21.81■■□□□ 1.08
RIPK4P57078 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RIPK4P57078 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK4P57078 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK4P57078 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RIPK4P57078 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK4P57078 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIPK4P57078 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RIPK4P57078 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RIPK4P57078 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.8■■□□□ 1.08
RIPK4P57078 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RIPK4P57078 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
RIPK4P57078 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RIPK4P57078 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.8■■□□□ 1.08
RIPK4P57078 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RIPK4P57078 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 TNRC18P3-201ENST00000441896 2691 ntBASIC21.8■■□□□ 1.08
RIPK4P57078 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.8■■□□□ 1.08
RIPK4P57078 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
RIPK4P57078 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.8■■□□□ 1.08
RIPK4P57078 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RIPK4P57078 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.8■■□□□ 1.08
RIPK4P57078 AL592309.1-201ENST00000443127 649 ntBASIC21.8■■□□□ 1.08
RIPK4P57078 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.8■■□□□ 1.08
RIPK4P57078 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.8■■□□□ 1.08
RIPK4P57078 AC004835.2-201ENST00000603762 682 ntBASIC21.8■■□□□ 1.08
RIPK4P57078 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RIPK4P57078 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 NKILA-202ENST00000614771 2598 ntBASIC21.8■■□□□ 1.08
RIPK4P57078 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIPK4P57078 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.8■■□□□ 1.08
RIPK4P57078 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.79■■□□□ 1.08
RIPK4P57078 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK4P57078 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.79■■□□□ 1.08
RIPK4P57078 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK4P57078 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK4P57078 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK4P57078 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.79■■□□□ 1.08
RIPK4P57078 KRT18P34-201ENST00000488218 1270 ntBASIC21.79■■□□□ 1.08
RIPK4P57078 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RIPK4P57078 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.79■■□□□ 1.08
RIPK4P57078 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.79■■□□□ 1.08
RIPK4P57078 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
RIPK4P57078 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.79■■□□□ 1.08
RIPK4P57078 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RIPK4P57078 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK4P57078 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.79■■□□□ 1.08
RIPK4P57078 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RIPK4P57078 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RIPK4P57078 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RIPK4P57078 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.78■■□□□ 1.08
RIPK4P57078 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RIPK4P57078 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
RIPK4P57078 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIPK4P57078 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RIPK4P57078 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms