Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 AC002056.1-201ENST00000395613 760 ntBASIC17.71■□□□□ 0.43
CACNA2D1P54289 AL355306.1-201ENST00000415580 579 ntBASIC17.71■□□□□ 0.43
CACNA2D1P54289 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.71■□□□□ 0.43
CACNA2D1P54289 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CACNA2D1P54289 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNA2D1P54289 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CACNA2D1P54289 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.71■□□□□ 0.42
CACNA2D1P54289 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 AL596257.1-201ENST00000641463 2694 ntBASIC17.7■□□□□ 0.42
CACNA2D1P54289 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 AL031055.1-201ENST00000606362 631 ntBASIC17.7■□□□□ 0.42
CACNA2D1P54289 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNA2D1P54289 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNA2D1P54289 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 AC006277.1-201ENST00000624348 1610 ntBASIC17.69■□□□□ 0.42
CACNA2D1P54289 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 ACTG1P14-201ENST00000446382 1122 ntBASIC17.69■□□□□ 0.42
CACNA2D1P54289 KRT8P48-201ENST00000515599 1220 ntBASIC17.69■□□□□ 0.42
CACNA2D1P54289 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 AC027612.4-201ENST00000605371 583 ntBASIC17.69■□□□□ 0.42
CACNA2D1P54289 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 AC105339.1-204ENST00000636249 355 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms