Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PDX1P52945 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.22■□□□□ 0.19
PDX1P52945 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 TUBB3P1-201ENST00000405796 1332 ntBASIC16.22■□□□□ 0.19
PDX1P52945 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDX1P52945 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 PRORSD1P-202ENST00000563365 2154 ntBASIC16.22■□□□□ 0.19
PDX1P52945 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.22■□□□□ 0.19
PDX1P52945 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.22■□□□□ 0.19
PDX1P52945 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.22■□□□□ 0.19
PDX1P52945 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDX1P52945 MIR661-201ENST00000384842 89 ntBASIC16.22■□□□□ 0.19
PDX1P52945 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.22■□□□□ 0.19
PDX1P52945 RBPMS2P1-201ENST00000437762 623 ntBASIC16.22■□□□□ 0.19
PDX1P52945 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.22■□□□□ 0.19
PDX1P52945 SPDYE14P-201ENST00000442619 822 ntBASIC16.22■□□□□ 0.19
PDX1P52945 KLF2P3-201ENST00000451977 1087 ntBASIC16.22■□□□□ 0.19
PDX1P52945 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.22■□□□□ 0.19
PDX1P52945 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 RNA5SP421-201ENST00000516864 134 ntBASIC16.22■□□□□ 0.19
PDX1P52945 AC109635.5-201ENST00000533593 962 ntBASIC16.22■□□□□ 0.19
PDX1P52945 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
PDX1P52945 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.22■□□□□ 0.19
PDX1P52945 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.22■□□□□ 0.19
PDX1P52945 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDX1P52945 AL161645.1-201ENST00000622716 1255 ntBASIC16.22■□□□□ 0.19
PDX1P52945 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.22■□□□□ 0.19
PDX1P52945 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.22■□□□□ 0.19
PDX1P52945 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PDX1P52945 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDX1P52945 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDX1P52945 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PDX1P52945 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PDX1P52945 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PDX1P52945 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.21■□□□□ 0.19
PDX1P52945 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.21■□□□□ 0.19
PDX1P52945 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.21■□□□□ 0.19
PDX1P52945 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 AC084121.4-201ENST00000641598 221 ntBASIC16.21■□□□□ 0.19
PDX1P52945 AF228730.8-201ENST00000642140 221 ntBASIC16.21■□□□□ 0.19
PDX1P52945 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PDX1P52945 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDX1P52945 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PDX1P52945 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PDX1P52945 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PDX1P52945 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.21■□□□□ 0.18
PDX1P52945 AC116353.5-201ENST00000638148 1699 ntBASIC16.21■□□□□ 0.18
PDX1P52945 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PDX1P52945 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.2■□□□□ 0.18
PDX1P52945 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 AC012569.1-201ENST00000591191 1524 ntBASIC16.2■□□□□ 0.18
PDX1P52945 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 AC009053.2-201ENST00000563701 2365 ntBASIC16.2■□□□□ 0.18
PDX1P52945 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PDX1P52945 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms