Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC087163.2-201ENST00000457299 853 ntBASIC15.26■□□□□ 0.03
HMGA2P52926 BX005266.1-201ENST00000473402 457 ntBASIC15.26■□□□□ 0.03
HMGA2P52926 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGA2P52926 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HMGA2P52926 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HMGA2P52926 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGA2P52926 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
HMGA2P52926 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 AC132008.2-207ENST00000454517 770 ntBASIC15.25■□□□□ 0.03
HMGA2P52926 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGA2P52926 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGA2P52926 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGA2P52926 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.25■□□□□ 0.03
HMGA2P52926 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGA2P52926 NKAPP1-205ENST00000585790 367 ntBASIC15.25■□□□□ 0.03
HMGA2P52926 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 CYP2A7P1-201ENST00000595391 815 ntBASIC15.25■□□□□ 0.03
HMGA2P52926 AC099336.1-202ENST00000602961 463 ntBASIC15.25■□□□□ 0.03
HMGA2P52926 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
HMGA2P52926 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HMGA2P52926 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 SLC22A20-204ENST00000530038 1673 ntBASIC15.25■□□□□ 0.03
HMGA2P52926 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGA2P52926 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGA2P52926 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HMGA2P52926 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HMGA2P52926 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 AC069224.1-201ENST00000566372 1715 ntBASIC15.24■□□□□ 0.03
HMGA2P52926 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGA2P52926 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 AP000867.3-201ENST00000524675 377 ntBASIC15.24■□□□□ 0.03
HMGA2P52926 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.24■□□□□ 0.03
HMGA2P52926 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 NPAP1P7-201ENST00000613027 823 ntBASIC15.24■□□□□ 0.03
HMGA2P52926 AL139288.1-201ENST00000623748 933 ntBASIC15.24■□□□□ 0.03
HMGA2P52926 PGM5P2-202ENST00000637225 1043 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms